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ClickHouse database patterns, query optimization, analytics, and data engineering best practices for high-performance analytical workloads.

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Updated time June 29, 2026

About clickhouse-io

clickhouse-io is a reusable AI skill focused on a specific workflow. description: ClickHouse database patterns, query optimization, analytics, and data engineering best practices for high-performance analytical workloads.

The skill packages instructions, conventions, and task-specific guidance so an agent can execute the job more consistently. ClickHouse-specific patterns for high-performance analytics and data engineering. - Designing ClickHouse table schemas (MergeTree engine selection) - Writing analytical queries (aggregations, window functions, joins)

In practice, this skill is best suited for users who need repeatable execution with fewer setup steps and less ambiguity. - Optimizing query performance (partition pruning, projections, materialized views) - Ingesting large volumes of data (batch inserts, Kafka integration) - Migrating from PostgreSQL/MySQL to ClickHouse for analytics - Implementing real-time dashboards or time-series analytics

FAQ

What does clickhouse-io help with?

clickhouse-io helps agents follow a focused workflow described in the source documentation, reducing ambiguity and keeping execution aligned with the intended task.

When should this skill be used?

Use it when the task matches the workflow, domain, or operating rules described in the skill documentation, especially when consistent execution matters.

What are the main limitations?

The skill is constrained by the quality and scope of its source instructions. If the underlying documentation is incomplete, the agent may still need extra context or manual validation.

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ClickHouse Analytics Patterns

ClickHouse-specific patterns for high-performance analytics and data engineering.

When to Activate

  • Designing ClickHouse table schemas (MergeTree engine selection)
  • Writing analytical queries (aggregations, window functions, joins)
  • Optimizing query performance (partition pruning, projections, materialized views)
  • Ingesting large volumes of data (batch inserts, Kafka integration)
  • Migrating from PostgreSQL/MySQL to ClickHouse for analytics
  • Implementing real-time dashboards or time-series analytics

Overview

ClickHouse is a column-oriented database management system (DBMS) for online analytical processing (OLAP). It's optimized for fast analytical queries on large datasets.

Key Features:

  • Column-oriented storage
  • Data compression
  • Parallel query execution
  • Distributed queries
  • Real-time analytics

Table Design Patterns

MergeTree Engine (Most Common)

CREATE TABLE markets_analytics (    date Date,    market_id String,    market_name String,    volume UInt64,    trades UInt32,    unique_traders UInt32,    avg_trade_size Float64,    created_at DateTime) ENGINE = MergeTree()PARTITION BY toYYYYMM(date)ORDER BY (date, market_id)SETTINGS index_granularity = 8192;

ReplacingMergeTree (Deduplication)

-- For data that may have duplicates (e.g., from multiple sources)CREATE TABLE user_events (    event_id String,    user_id String,    event_type String,    timestamp DateTime,    properties String) ENGINE = ReplacingMergeTree()PARTITION BY toYYYYMM(timestamp)ORDER BY (user_id, event_id, timestamp)PRIMARY KEY (user_id, event_id);

AggregatingMergeTree (Pre-aggregation)

-- For maintaining aggregated metricsCREATE TABLE market_stats_hourly (    hour DateTime,    market_id String,    total_volume AggregateFunction(sum, UInt64),    total_trades AggregateFunction(count, UInt32),    unique_users AggregateFunction(uniq, String)) ENGINE = AggregatingMergeTree()PARTITION BY toYYYYMM(hour)ORDER BY (hour, market_id);-- Query aggregated dataSELECT    hour,    market_id,    sumMerge(total_volume) AS volume,    countMerge(total_trades) AS trades,    uniqMerge(unique_users) AS usersFROM market_stats_hourlyWHERE hour >= toStartOfHour(now() - INTERVAL 24 HOUR)GROUP BY hour, market_idORDER BY hour DESC;

Query Optimization Patterns

Efficient Filtering

-- PASS: GOOD: Use indexed columns firstSELECT *FROM markets_analyticsWHERE date >= '2025-01-01'  AND market_id = 'market-123'  AND volume > 1000ORDER BY date DESCLIMIT 100;-- FAIL: BAD: Filter on non-indexed columns firstSELECT *FROM markets_analyticsWHERE volume > 1000  AND market_name LIKE '%election%'  AND date >= '2025-01-01';

Aggregations

-- PASS: GOOD: Use ClickHouse-specific aggregation functionsSELECT    toStartOfDay(created_at) AS day,    market_id,    sum(volume) AS total_volume,    count() AS total_trades,    uniq(trader_id) AS unique_traders,    avg(trade_size) AS avg_sizeFROM tradesWHERE created_at >= today() - INTERVAL 7 DAYGROUP BY day, market_idORDER BY day DESC, total_volume DESC;-- PASS: Use quantile for percentiles (more efficient than percentile)SELECT    quantile(0.50)(trade_size) AS median,    quantile(0.95)(trade_size) AS p95,    quantile(0.99)(trade_size) AS p99FROM tradesWHERE created_at >= now() - INTERVAL 1 HOUR;

Window Functions

-- Calculate running totalsSELECT    date,    market_id,    volume,    sum(volume) OVER (        PARTITION BY market_id        ORDER BY date        ROWS BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW    ) AS cumulative_volumeFROM markets_analyticsWHERE date >= today() - INTERVAL 30 DAYORDER BY market_id, date;

Data Insertion Patterns

Bulk Insert (Recommended)

import { ClickHouse } from 'clickhouse'const clickhouse = new ClickHouse({  url: process.env.CLICKHOUSE_URL,  port: 8123,  basicAuth: {    username: process.env.CLICKHOUSE_USER,    password: process.env.CLICKHOUSE_PASSWORD  }})// PASS: Batch insert (efficient)async function bulkInsertTrades(trades: Trade[]) {  const values = trades.map(trade => `(    '${trade.id}',    '${trade.market_id}',    '${trade.user_id}',    ${trade.amount},    '${trade.timestamp.toISOString()}'  )`).join(',')  await clickhouse.query(`    INSERT INTO trades (id, market_id, user_id, amount, timestamp)    VALUES ${values}  `).toPromise()}// FAIL: Individual inserts (slow)async function insertTrade(trade: Trade) {  // Don't do this in a loop!  await clickhouse.query(`    INSERT INTO trades VALUES ('${trade.id}', ...)  `).toPromise()}

Streaming Insert

// For continuous data ingestionimport { createWriteStream } from 'fs'import { pipeline } from 'stream/promises'async function streamInserts() {  const stream = clickhouse.insert('trades').stream()  for await (const batch of dataSource) {    stream.write(batch)  }  await stream.end()}

Materialized Views

Real-time Aggregations

-- Create materialized view for hourly statsCREATE MATERIALIZED VIEW market_stats_hourly_mvTO market_stats_hourlyAS SELECT    toStartOfHour(timestamp) AS hour,    market_id,    sumState(amount) AS total_volume,    countState() AS total_trades,    uniqState(user_id) AS unique_usersFROM tradesGROUP BY hour, market_id;-- Query the materialized viewSELECT    hour,    market_id,    sumMerge(total_volume) AS volume,    countMerge(total_trades) AS trades,    uniqMerge(unique_users) AS usersFROM market_stats_hourlyWHERE hour >= now() - INTERVAL 24 HOURGROUP BY hour, market_id;

Performance Monitoring

Query Performance

-- Check slow queriesSELECT    query_id,    user,    query,    query_duration_ms,    read_rows,    read_bytes,    memory_usageFROM system.query_logWHERE type = 'QueryFinish'  AND query_duration_ms > 1000  AND event_time >= now() - INTERVAL 1 HOURORDER BY query_duration_ms DESCLIMIT 10;

Table Statistics

-- Check table sizesSELECT    database,    table,    formatReadableSize(sum(bytes)) AS size,    sum(rows) AS rows,    max(modification_time) AS latest_modificationFROM system.partsWHERE activeGROUP BY database, tableORDER BY sum(bytes) DESC;

Common Analytics Queries

Time Series Analysis

-- Daily active usersSELECT    toDate(timestamp) AS date,    uniq(user_id) AS daily_active_usersFROM eventsWHERE timestamp >= today() - INTERVAL 30 DAYGROUP BY dateORDER BY date;-- Retention analysisSELECT    signup_date,    countIf(days_since_signup = 0) AS day_0,    countIf(days_since_signup = 1) AS day_1,    countIf(days_since_signup = 7) AS day_7,    countIf(days_since_signup = 30) AS day_30FROM (    SELECT        user_id,        min(toDate(timestamp)) AS signup_date,        toDate(timestamp) AS activity_date,        dateDiff('day', signup_date, activity_date) AS days_since_signup    FROM events    GROUP BY user_id, activity_date)GROUP BY signup_dateORDER BY signup_date DESC;

Funnel Analysis

-- Conversion funnelSELECT    countIf(step = 'viewed_market') AS viewed,    countIf(step = 'clicked_trade') AS clicked,    countIf(step = 'completed_trade') AS completed,    round(clicked / viewed * 100, 2) AS view_to_click_rate,    round(completed / clicked * 100, 2) AS click_to_completion_rateFROM (    SELECT        user_id,        session_id,        event_type AS step    FROM events    WHERE event_date = today())GROUP BY session_id;

Cohort Analysis

-- User cohorts by signup monthSELECT    toStartOfMonth(signup_date) AS cohort,    toStartOfMonth(activity_date) AS month,    dateDiff('month', cohort, month) AS months_since_signup,    count(DISTINCT user_id) AS active_usersFROM (    SELECT        user_id,        min(toDate(timestamp)) OVER (PARTITION BY user_id) AS signup_date,        toDate(timestamp) AS activity_date    FROM events)GROUP BY cohort, month, months_since_signupORDER BY cohort, months_since_signup;

Data Pipeline Patterns

ETL Pattern

// Extract, Transform, Loadasync function etlPipeline() {  // 1. Extract from source  const rawData = await extractFromPostgres()  // 2. Transform  const transformed = rawData.map(row => ({    date: new Date(row.created_at).toISOString().split('T')[0],    market_id: row.market_slug,    volume: parseFloat(row.total_volume),    trades: parseInt(row.trade_count)  }))  // 3. Load to ClickHouse  await bulkInsertToClickHouse(transformed)}// Run periodicallysetInterval(etlPipeline, 60 * 60 * 1000)  // Every hour

Change Data Capture (CDC)

// Listen to PostgreSQL changes and sync to ClickHouseimport { Client } from 'pg'const pgClient = new Client({ connectionString: process.env.DATABASE_URL })pgClient.query('LISTEN market_updates')pgClient.on('notification', async (msg) => {  const update = JSON.parse(msg.payload)  await clickhouse.insert('market_updates', [    {      market_id: update.id,      event_type: update.operation,  // INSERT, UPDATE, DELETE      timestamp: new Date(),      data: JSON.stringify(update.new_data)    }  ])})

Best Practices

1. Partitioning Strategy

  • Partition by time (usually month or day)
  • Avoid too many partitions (performance impact)
  • Use DATE type for partition key

2. Ordering Key

  • Put most frequently filtered columns first
  • Consider cardinality (high cardinality first)
  • Order impacts compression

3. Data Types

  • Use smallest appropriate type (UInt32 vs UInt64)
  • Use LowCardinality for repeated strings
  • Use Enum for categorical data

4. Avoid

  • SELECT * (specify columns)
  • FINAL (merge data before query instead)
  • Too many JOINs (denormalize for analytics)
  • Small frequent inserts (batch instead)

5. Monitoring

  • Track query performance
  • Monitor disk usage
  • Check merge operations
  • Review slow query log

Remember: ClickHouse excels at analytical workloads. Design tables for your query patterns, batch inserts, and leverage materialized views for real-time aggregations.

All Files

1 files
SKILL.md 10.2k
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Install clickhouse-io

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git clone https://github.com/affaan-m/ECC/blob/main/skills/clickhouse-io/SKILL.md # Copy SKILL.md to your .claude/skills/ directory

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